Recognition of Outer Membrane Proteins Using Adaptive Neuro-Fuzzy Inference Systems

摘要：

　　Recognition of outer membrane proteins(OMPs)from non-OMPs(global protein or inner protein)is one of the most important tasks in the field of computational biology and bioinformatics.Successful discrimination of OMPs from other types of proteins would help to identify new OMPs for biological applications.In this article,protein sequence index(PSI)and dipeptide motifs were applied to recognize OMPs from non-OMPs using adaptive neuro-fuzzy inference systems(ANFIS),results show that ANFIS can recognize OMPs from non-OMPs with high accuracy,and our method only depended on amino acid sequence.

关键词： adaptive neuro-fuzzy inference systems outer membrane protein recognition protein sequence index

作者: Zhijun Wang Qiangyan Pan Lifeng Yang Chunyan Xu Feng Yu Liang Li Jianhua He

作者单位: Shanghai Institute of Applied Physics,Chinese Academy of Sciences,Shanghai 201204,P.R. China

会议类型: 国际会议

会议名称: The 2014 10th International Conference on Natural Computation (ICNC 2014) and the 2014 11th International Conference on Fuzzy Systems and Knowledge Discovery (FSKD 2014)(第十届自然计算和第十一届模糊系统与知识发现国际会议)

会议地点: 厦门

会议语种:英文

页码: 270-275

在线出版日期: 2014-08-19（万方平台首次上网日期，不代表论文的发表时间）