Bioinformatics analysis of UL39 gene from Duck Plague Virus
The structures and characteristics of the large subunit of ribonucleotide reductase (R1),encoded by UL39 gene from duck plague virus (DPV) were analyzed and predicted by using a series of free bioinformatics software packages and bioinformatics tools.The DPV UL39 gene has a base composition of 681 adenine (27.99%),503 cytosine (20.67%),593 guanine (24.37%) and 656 thymine (26.96%).The online analysis of the physico-chemical properties demonstrates that the protein has 40 potential phosphorylation sites and 4 N-glycosylation sites when the threshold of prediction score is above 0.5; without the signal peptide and the transmembrance region.The phylogenetic tree proved that DPV R1 protein had a close evolutionary relationship with the Mardivirus genus of the Alphaherpesviruses.In conclusion,all those results will provide some valuable information for the further research ofUL39 gene.
Bioinformatics analysis UL39 gene Duck Plague Virus
Guofu LU Anchun CHENG Mingshu WANG
Institute of Preventive Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu city Institute of Preventive Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu city
国际会议
厦门
英文
645-653
2012-12-28（万方平台首次上网日期，不代表论文的发表时间）