The Scoring Function Based on Amino Acid Network

摘要：

With the contact energy between residues as the weight, we constructed a weighted amino acid network. Two parameters are introduced. Based on this network model, we proposed a new docking scoring function Sn. For 42 systems bound docking results, we do the scoring sort with this scorning function. Comparing the results got from this new scorning function with that from the RP scorning function, we find that the Sn scorning function has a better performance than the RP on some items.

关键词： amino acid network protein-protein docking scorning function unbound docking network parameter

作者: Xiong Jiao Lifeng Yang

作者单位: Institute of Applied Mechanics and Biomedical Engineering College of Sciences Taiyuan University of technology Taiyuan 030024, China

会议类型: 国际会议

会议名称: 2011 4th International Conference on Biomedical Engineering and Informatics(第四届生物医学工程与信息学国际会议 BMEI 2011)

会议地点: 上海

会议语种:英文

页码: 2010-2013

在线出版日期: 2011-10-15（万方平台首次上网日期，不代表论文的发表时间）