Constructing Metabolic Networks Based on Bipartite Model within MATLAB
To analyze and visualize metabolic networks are hot in systems biology. One of essential problems is to construct metabolic networks from numerous metabolic equations automatically and reasonably. Based on bipartite model, a method of construction metabolic networks from metabolic equations was proposed and the procedural steps of MATLAB were given. The output constructed networks were checked by visualization software of biological network. The result shows this method is feasible and suitable for general requirements of construction complex metabolic networks from numerous metabolic equations. The MATLAB scripts for our methods are available online at http://bioinf.jiangnan.edu.cn/.
metabolic network visualization MATLAB bipartite model
Sheng He Yu Pan Fang-sheng Wu Yi Liu Juan Mei Wei-jiang Li
School of Biotechnology, Jiangnan University, Wuxi, China School of Computer Science, Jiangsu Teache School of Computer Science, Jiangsu Teachers University of Technology,Changzhou,China School of Biotechnology, Jiangnan University, Wuxi, China
国际会议
成都
英文
330-332
2010-06-12（万方平台首次上网日期，不代表论文的发表时间）