Small-world network approach to identify nucleus residues of the B1 domain of protein G＃

摘要：

The B1 domain of protein G is a paradigm for kinetics studies. In this work, the protein structure of GB1 is modeled as an unweighted amino acid network. We find that the unweighted amino acid network is the typical property of small-world network. The nucleus residues of GB1 are identified by the analysis of the network parameter: betweenness. The results are consistent with the previous experimental and theoretical studies.

关键词： Complez network nucleus residues amino acid network Betweenness

作者: Hai-yan Li Ji-hua Wang Li-ling Zhao Xiang-hua Dou Xiu-ping Luo

作者单位: Key Lab of Biophysics in university of Shandong Province, Dezhou 253023
Shandong, China College of Key Lab of Biophysics in university of Shandong Province, Dezhou 253023
Shandong, China

会议类型: 国际会议

会议名称: The 2nd International Conference on Bioinformatics and Biomedical Engineering(iCBBE 2008)(第二届生物信息与生物医学工程国际会议)

会议地点: 上海

会议语种:英文

页码: 211-214

在线出版日期: 2008-05-16（万方平台首次上网日期，不代表论文的发表时间）