A Non-EST-Based Method for Alternative 5/3 Splice Sites Prediction in the Mouse Genome

摘要：

The identification of alternative splice site in the mouse genome is an important part of the recent alternative splicing event prediction work. In this paper, a non-EST-based predicting method is proposed for alternative 5/3 splice sites identification. Only based on local sequence features, more than 72％ of alternative splice sites and constitutive splice sites can be correctly classified in the mouse genome.

关键词： competitive splice site pair alternative splice site support vector machine

作者: Wuritu Yang Qian-zhong Li

作者单位: Laboratory of Theoretical Biophysics, Department of Physics, Inner Mongolia University Hohhot, China

会议类型: 国际会议

会议名称: The 2nd International Conference on Bioinformatics and Biomedical Engineering(iCBBE 2008)(第二届生物信息与生物医学工程国际会议)

会议地点: 上海

会议语种:英文

页码: 1901-1904

在线出版日期: 2008-05-16（万方平台首次上网日期，不代表论文的发表时间）