An annotation system focused on metabolic reconstruction and comparative genomics: characterization of an acidophilic microbial community

摘要：

IntroductionNew high-throughput technologies are making genome sequencing more affordable both in terms of time and economic cost, thus annotation has probably become the bottle-neck in genome analysis.Data & MethodsWe present a microbial genome annotation system focused on metabolic reconstruction and comparative genomics that combines in-house developed software with several public domain applications and databases. Among other features, the system includes tRNA gene detection, protein gene prediction,functional annotation and assignation to protein families, and mapping of clones onto the genome structure.

作者: A.Arcas N.Alvarez M.Postigo M.Moreno V.Parro M.Gómez

作者单位: Sequencing and Bioinformatics Unit, Centre for Astrobiology (INTA-CSIC), Torrejón de Ardoz, Madrid, Sequencing and Bioinformatics Unit, Centre for Astrobiology (INTA-CSIC), Torrejón de Ardoz, Madrid, Molecular Ecology Laboratory, Centre for Astrobiology (INTA-CSIC), Torrejón de Ardoz, Madrid, Spain

会议类型: 国际会议

会议名称: The 7th Asia-Pacific Bioinformatics Conference(第七届亚太生物信息学大会)

会议地点: 北京

会议语种:英文

页码: 829

在线出版日期: 2009-01-01（万方平台首次上网日期，不代表论文的发表时间）